Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 MTDHP3-201ENST00000594186 672 ntBASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 AL139424.1-201ENST00000607572 797 ntBASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 AC114271.1-201ENST00000612689 2813 ntBASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 AP005117.1-201ENST00000584346 1413 ntBASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
KCNIP4Q6PIL6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 MIR497HG-202ENST00000572453 3838 ntBASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AC107918.2-201ENST00000530817 355 ntBASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AL589182.2-201ENST00000619332 1049 ntBASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AC016397.2-201ENST00000624848 1985 ntBASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP4Q6PIL6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms