Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AC022188.1-201ENST00000620960 1664 ntBASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 HLA-DMA-203ENST00000395305 777 ntBASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 ABHD17AP9-201ENST00000561925 548 ntBASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AP000322.3-201ENST00000608665 388 ntBASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 AC009560.1-201ENST00000620208 434 ntBASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 Z98259.2-201ENST00000641583 609 ntBASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO4Q2I0M5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.46□□□□□ -0.1
RSPO4Q2I0M5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO4Q2I0M5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO4Q2I0M5 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.46□□□□□ -0.1
RSPO4Q2I0M5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO4Q2I0M5 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RSPO4Q2I0M5 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 AC009093.2-202ENST00000620513 2079 ntBASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 TSPY25P-201ENST00000429463 745 ntBASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 HLA-DPA2-205ENST00000433582 733 ntBASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 DPY19L2P5-201ENST00000456300 331 ntBASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 AC012073.1-201ENST00000606114 1108 ntBASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.45□□□□□ -0.1
RSPO4Q2I0M5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
RSPO4Q2I0M5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms