Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 AC087499.5-201ENST00000452760 1342 ntBASIC13.63□□□□□ -0.23
CDK5Q00535 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDK5Q00535 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
CDK5Q00535 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDK5Q00535 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CDK5Q00535 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CDK5Q00535 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 KRT8P24-201ENST00000560290 1559 ntBASIC13.62□□□□□ -0.23
CDK5Q00535 AC005252.3-201ENST00000623855 2258 ntBASIC13.62□□□□□ -0.23
CDK5Q00535 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDK5Q00535 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDK5Q00535 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDK5Q00535 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.62□□□□□ -0.23
CDK5Q00535 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.62□□□□□ -0.23
CDK5Q00535 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.62□□□□□ -0.23
CDK5Q00535 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 AL391069.4-201ENST00000609583 481 ntBASIC13.62□□□□□ -0.23
CDK5Q00535 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.62□□□□□ -0.23
CDK5Q00535 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.62□□□□□ -0.23
CDK5Q00535 AL158212.4-201ENST00000624062 1286 ntBASIC13.62□□□□□ -0.23
CDK5Q00535 AC073592.8-201ENST00000624126 511 ntBASIC13.62□□□□□ -0.23
CDK5Q00535 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDK5Q00535 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDK5Q00535 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CDK5Q00535 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
CDK5Q00535 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDK5Q00535 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDK5Q00535 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CDK5Q00535 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 AL139400.1-201ENST00000366220 510 ntBASIC13.61□□□□□ -0.23
CDK5Q00535 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.61□□□□□ -0.23
CDK5Q00535 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.61□□□□□ -0.23
CDK5Q00535 TMEM198B-204ENST00000484016 896 ntBASIC13.61□□□□□ -0.23
CDK5Q00535 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 MIR3687-2-201ENST00000577708 61 ntBASIC13.61□□□□□ -0.23
CDK5Q00535 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.61□□□□□ -0.23
CDK5Q00535 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.61□□□□□ -0.23
CDK5Q00535 MIR3687-1-201ENST00000614492 61 ntBASIC13.61□□□□□ -0.23
CDK5Q00535 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 DRD5P1-201ENST00000456605 1438 ntBASIC13.61□□□□□ -0.23
CDK5Q00535 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CDK5Q00535 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CDK5Q00535 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
CDK5Q00535 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.61□□□□□ -0.23
CDK5Q00535 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms