Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 AC092865.6-201ENST00000642101 219 ntBASIC10.73□□□□□ -0.69
RPL39P62891 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RPL39P62891 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.73□□□□□ -0.69
RPL39P62891 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 AC105206.1-202ENST00000314927 2368 ntBASIC10.73□□□□□ -0.69
RPL39P62891 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RPL39P62891 MRPL3P1-201ENST00000400109 1033 ntBASIC10.72□□□□□ -0.69
RPL39P62891 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RPL39P62891 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
RPL39P62891 HIST3H2BA-201ENST00000436555 524 ntBASIC10.72□□□□□ -0.69
RPL39P62891 SPDYE11-202ENST00000450699 704 ntBASIC10.72□□□□□ -0.69
RPL39P62891 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.72□□□□□ -0.69
RPL39P62891 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 AC022447.6-201ENST00000515522 438 ntBASIC10.72□□□□□ -0.69
RPL39P62891 RNA5SP419-201ENST00000515908 135 ntBASIC10.72□□□□□ -0.69
RPL39P62891 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC10.72□□□□□ -0.69
RPL39P62891 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 AC034105.1-201ENST00000563488 319 ntBASIC10.72□□□□□ -0.69
RPL39P62891 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.72□□□□□ -0.69
RPL39P62891 SPDYE9P-201ENST00000570642 692 ntBASIC10.72□□□□□ -0.69
RPL39P62891 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.72□□□□□ -0.69
RPL39P62891 UBL5-208ENST00000593087 320 ntTSL 3 BASIC10.72□□□□□ -0.69
RPL39P62891 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC10.72□□□□□ -0.69
RPL39P62891 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 SPDYE10P-202ENST00000612005 668 ntBASIC10.72□□□□□ -0.69
RPL39P62891 SPDYE8P-202ENST00000612377 668 ntBASIC10.72□□□□□ -0.69
RPL39P62891 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 LILRP1-201ENST00000444199 1370 ntBASIC10.72□□□□□ -0.69
RPL39P62891 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.72□□□□□ -0.69
RPL39P62891 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 UXT-AS1-201ENST00000590504 1525 ntBASIC10.72□□□□□ -0.69
RPL39P62891 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.72□□□□□ -0.69
RPL39P62891 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
RPL39P62891 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RPL39P62891 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms