Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC015922.1-201ENST00000421102 1152 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.32□□□□□ -0.28
SEC61A1P61619 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 GNAQP1-201ENST00000444815 1067 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 AC004233.3-201ENST00000607794 1269 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 AL109936.8-201ENST00000641772 604 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.32□□□□□ -0.28
SEC61A1P61619 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.32□□□□□ -0.28
SEC61A1P61619 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.32□□□□□ -0.28
SEC61A1P61619 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SEC61A1P61619 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.32□□□□□ -0.28
SEC61A1P61619 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.32□□□□□ -0.28
SEC61A1P61619 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC61A1P61619 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SEC61A1P61619 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC61A1P61619 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC61A1P61619 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC61A1P61619 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.31□□□□□ -0.28
SEC61A1P61619 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.31□□□□□ -0.28
SEC61A1P61619 HIST3H2BA-201ENST00000436555 524 ntBASIC13.31□□□□□ -0.28
SEC61A1P61619 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC13.31□□□□□ -0.28
SEC61A1P61619 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
SEC61A1P61619 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.31□□□□□ -0.28
SEC61A1P61619 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.31□□□□□ -0.28
SEC61A1P61619 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.31□□□□□ -0.28
SEC61A1P61619 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC61A1P61619 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.31□□□□□ -0.28
SEC61A1P61619 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 BNIP3P1-202ENST00000550043 1585 ntBASIC13.31□□□□□ -0.28
SEC61A1P61619 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.31□□□□□ -0.28
SEC61A1P61619 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.31□□□□□ -0.28
SEC61A1P61619 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 DGCR9-201ENST00000609630 2415 ntBASIC13.31□□□□□ -0.28
SEC61A1P61619 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.31□□□□□ -0.28
SEC61A1P61619 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SEC61A1P61619 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms