Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.86□□□□□ -0.19
CDC42P60953 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDC42P60953 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.86□□□□□ -0.19
CDC42P60953 TIMM8BP1-201ENST00000452384 211 ntBASIC13.86□□□□□ -0.19
CDC42P60953 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.86□□□□□ -0.19
CDC42P60953 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.86□□□□□ -0.19
CDC42P60953 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
CDC42P60953 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.86□□□□□ -0.19
CDC42P60953 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
CDC42P60953 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.86□□□□□ -0.19
CDC42P60953 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CDC42P60953 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CDC42P60953 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC42P60953 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 AL591424.1-201ENST00000442569 1213 ntBASIC13.85□□□□□ -0.19
CDC42P60953 AL592309.1-201ENST00000443127 649 ntBASIC13.85□□□□□ -0.19
CDC42P60953 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 RPL13AP23-201ENST00000480739 586 ntBASIC13.85□□□□□ -0.19
CDC42P60953 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.85□□□□□ -0.19
CDC42P60953 BANF1P1-201ENST00000553684 263 ntBASIC13.85□□□□□ -0.19
CDC42P60953 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC42P60953 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
CDC42P60953 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CDC42P60953 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.85□□□□□ -0.19
CDC42P60953 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CDC42P60953 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.85□□□□□ -0.19
CDC42P60953 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.84□□□□□ -0.19
CDC42P60953 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDC42P60953 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms