Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CENPAP49450 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 AC090114.2-201ENST00000608477 7054 ntBASIC13.8□□□□□ -0.2
CENPAP49450 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.8□□□□□ -0.2
CENPAP49450 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.8□□□□□ -0.2
CENPAP49450 HLA-J-203ENST00000494367 1087 ntBASIC13.8□□□□□ -0.2
CENPAP49450 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.8□□□□□ -0.2
CENPAP49450 IGHV3-42-201ENST00000520410 361 ntBASIC13.8□□□□□ -0.2
CENPAP49450 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 AC025048.3-201ENST00000590609 569 ntBASIC13.8□□□□□ -0.2
CENPAP49450 LINC01115-203ENST00000606068 577 ntBASIC13.8□□□□□ -0.2
CENPAP49450 AC005702.4-201ENST00000618393 416 ntBASIC13.8□□□□□ -0.2
CENPAP49450 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 AL109936.8-201ENST00000641772 604 ntBASIC13.8□□□□□ -0.2
CENPAP49450 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CENPAP49450 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 AJ011931.1-201ENST00000618749 2492 ntBASIC13.8□□□□□ -0.2
CENPAP49450 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CENPAP49450 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.8□□□□□ -0.2
CENPAP49450 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.79□□□□□ -0.2
CENPAP49450 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CENPAP49450 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CENPAP49450 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CENPAP49450 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.79□□□□□ -0.2
CENPAP49450 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.79□□□□□ -0.2
CENPAP49450 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CENPAP49450 AC015922.1-201ENST00000421102 1152 ntBASIC13.79□□□□□ -0.2
CENPAP49450 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms