Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.82■□□□□ 0.44
TNNI2P48788 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TNNI2P48788 AC011840.2-201ENST00000563063 1520 ntBASIC17.82■□□□□ 0.44
TNNI2P48788 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TNNI2P48788 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TNNI2P48788 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.82■□□□□ 0.44
TNNI2P48788 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.81■□□□□ 0.44
TNNI2P48788 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.81■□□□□ 0.44
TNNI2P48788 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.81■□□□□ 0.44
TNNI2P48788 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TNNI2P48788 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 AC090616.6-203ENST00000579186 1945 ntBASIC17.81■□□□□ 0.44
TNNI2P48788 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.81■□□□□ 0.44
TNNI2P48788 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TNNI2P48788 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TNNI2P48788 AC012441.2-201ENST00000444843 739 ntBASIC17.81■□□□□ 0.44
TNNI2P48788 AC234782.1-201ENST00000451950 919 ntBASIC17.81■□□□□ 0.44
TNNI2P48788 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.81■□□□□ 0.44
TNNI2P48788 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.81■□□□□ 0.44
TNNI2P48788 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.81■□□□□ 0.44
TNNI2P48788 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.81■□□□□ 0.44
TNNI2P48788 SNORD3B-2-202ENST00000571722 791 ntBASIC17.81■□□□□ 0.44
TNNI2P48788 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.81■□□□□ 0.44
TNNI2P48788 AL132994.2-201ENST00000603120 687 ntBASIC17.81■□□□□ 0.44
TNNI2P48788 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 AL353770.1-201ENST00000614915 403 ntBASIC17.81■□□□□ 0.44
TNNI2P48788 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 INE2-201ENST00000630399 1874 ntBASIC17.81■□□□□ 0.44
TNNI2P48788 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TNNI2P48788 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.81■□□□□ 0.44
TNNI2P48788 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TNNI2P48788 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TNNI2P48788 CICP11-201ENST00000434745 2827 ntBASIC17.8■□□□□ 0.44
TNNI2P48788 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TNNI2P48788 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.8■□□□□ 0.44
TNNI2P48788 REXO1L4P-201ENST00000605109 1937 ntBASIC17.8■□□□□ 0.44
TNNI2P48788 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.8■□□□□ 0.44
TNNI2P48788 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TNNI2P48788 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
TNNI2P48788 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.8■□□□□ 0.44
TNNI2P48788 AC009093.2-202ENST00000620513 2079 ntBASIC17.8■□□□□ 0.44
TNNI2P48788 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.8■□□□□ 0.44
TNNI2P48788 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.8■□□□□ 0.44
TNNI2P48788 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TNNI2P48788 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.8■□□□□ 0.44
TNNI2P48788 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.8■□□□□ 0.44
TNNI2P48788 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.8■□□□□ 0.44
TNNI2P48788 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.8■□□□□ 0.44
TNNI2P48788 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 AL160314.3-201ENST00000556041 767 ntBASIC17.8■□□□□ 0.44
TNNI2P48788 AP000346.4-201ENST00000614827 381 ntBASIC17.8■□□□□ 0.44
TNNI2P48788 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.8■□□□□ 0.44
TNNI2P48788 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TNNI2P48788 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNNI2P48788 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNNI2P48788 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.79■□□□□ 0.44
TNNI2P48788 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNNI2P48788 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNNI2P48788 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.79■□□□□ 0.44
TNNI2P48788 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms