Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
GDNFP39905 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 BANF1P1-201ENST00000553684 263 ntBASIC13.23□□□□□ -0.29
GDNFP39905 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 SNHG9-202ENST00000564014 471 ntBASIC13.23□□□□□ -0.29
GDNFP39905 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.23□□□□□ -0.29
GDNFP39905 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.23□□□□□ -0.29
GDNFP39905 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.23□□□□□ -0.29
GDNFP39905 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
GDNFP39905 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
GDNFP39905 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 AC023090.2-201ENST00000625182 2110 ntBASIC13.22□□□□□ -0.29
GDNFP39905 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.22□□□□□ -0.29
GDNFP39905 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
GDNFP39905 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.22□□□□□ -0.29
GDNFP39905 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.22□□□□□ -0.29
GDNFP39905 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.22□□□□□ -0.29
GDNFP39905 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.22□□□□□ -0.29
GDNFP39905 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 AC105206.1-202ENST00000314927 2368 ntBASIC13.22□□□□□ -0.29
GDNFP39905 AC055811.4-201ENST00000624039 1754 ntBASIC13.22□□□□□ -0.29
GDNFP39905 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.22□□□□□ -0.29
GDNFP39905 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
GDNFP39905 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
GDNFP39905 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
GDNFP39905 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.21□□□□□ -0.29
GDNFP39905 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 AL607033.1-201ENST00000623900 1599 ntBASIC13.21□□□□□ -0.29
GDNFP39905 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.21□□□□□ -0.29
GDNFP39905 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
GDNFP39905 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms