Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CPS1P31327 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 AL109809.1-201ENST00000418979 1367 ntBASIC20.67■□□□□ 0.9
CPS1P31327 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.67■□□□□ 0.9
CPS1P31327 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC20.67■□□□□ 0.9
CPS1P31327 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC20.67■□□□□ 0.9
CPS1P31327 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC20.67■□□□□ 0.9
CPS1P31327 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC20.67■□□□□ 0.9
CPS1P31327 OR5BD1P-201ENST00000532527 817 ntBASIC20.67■□□□□ 0.9
CPS1P31327 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CPS1P31327 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC20.67■□□□□ 0.9
CPS1P31327 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CPS1P31327 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.66■□□□□ 0.9
CPS1P31327 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC20.66■□□□□ 0.9
CPS1P31327 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC20.66■□□□□ 0.9
CPS1P31327 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC20.66■□□□□ 0.9
CPS1P31327 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 AC026691.1-201ENST00000602502 2017 ntBASIC20.66■□□□□ 0.9
CPS1P31327 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CPS1P31327 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.66■□□□□ 0.9
CPS1P31327 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 AC092580.1-201ENST00000433998 658 ntBASIC20.66■□□□□ 0.9
CPS1P31327 RN7SL846P-201ENST00000467429 292 ntBASIC20.66■□□□□ 0.9
CPS1P31327 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC20.66■□□□□ 0.9
CPS1P31327 BCL2L12P1-201ENST00000508390 733 ntBASIC20.66■□□□□ 0.9
CPS1P31327 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC20.66■□□□□ 0.9
CPS1P31327 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC20.66■□□□□ 0.9
CPS1P31327 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC20.66■□□□□ 0.9
CPS1P31327 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC20.66■□□□□ 0.9
CPS1P31327 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC20.66■□□□□ 0.9
CPS1P31327 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC20.66■□□□□ 0.9
CPS1P31327 BID-213ENST00000615414 2236 ntTSL 5 BASIC20.66■□□□□ 0.9
CPS1P31327 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.66■□□□□ 0.9
CPS1P31327 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CPS1P31327 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 REXO1L2P-201ENST00000425429 2069 ntBASIC20.66■□□□□ 0.9
CPS1P31327 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CPS1P31327 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC20.66■□□□□ 0.9
CPS1P31327 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CPS1P31327 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CPS1P31327 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.65■□□□□ 0.9
CPS1P31327 AC020658.6-201ENST00000623564 1870 ntBASIC20.65■□□□□ 0.9
CPS1P31327 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.65■□□□□ 0.9
CPS1P31327 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CPS1P31327 AL035414.1-201ENST00000451327 857 ntBASIC20.65■□□□□ 0.9
CPS1P31327 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC20.65■□□□□ 0.9
CPS1P31327 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC20.65■□□□□ 0.9
CPS1P31327 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.65■□□□□ 0.9
CPS1P31327 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC20.65■□□□□ 0.9
CPS1P31327 AC013726.1-201ENST00000563747 2285 ntBASIC20.65■□□□□ 0.9
CPS1P31327 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 AC126365.1-201ENST00000578585 1514 ntBASIC20.65■□□□□ 0.9
CPS1P31327 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CPS1P31327 AL365203.3-201ENST00000609742 2057 ntBASIC20.65■□□□□ 0.9
CPS1P31327 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CPS1P31327 AC023024.2-201ENST00000623561 1993 ntBASIC20.65■□□□□ 0.9
CPS1P31327 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPS1P31327 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPS1P31327 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.64■□□□□ 0.9
CPS1P31327 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPS1P31327 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
CPS1P31327 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPS1P31327 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC20.64■□□□□ 0.9
CPS1P31327 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CPS1P31327 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC20.64■□□□□ 0.9
CPS1P31327 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
CPS1P31327 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CPS1P31327 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC20.64■□□□□ 0.9
CPS1P31327 RGS5-216ENST00000449680 788 ntTSL 3 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms