Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC123567.1-201ENST00000548294 1261 ntBASIC14.18□□□□□ -0.14
CHMP24386 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.18□□□□□ -0.14
CHMP24386 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.18□□□□□ -0.14
CHMP24386 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
CHMP24386 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CHMP24386 AC006504.5-208ENST00000588784 2401 ntBASIC14.17□□□□□ -0.14
CHMP24386 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.17□□□□□ -0.14
CHMP24386 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 AC097359.2-201ENST00000604992 2389 ntBASIC14.17□□□□□ -0.14
CHMP24386 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CHMP24386 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.17□□□□□ -0.14
CHMP24386 AL133267.1-201ENST00000398220 340 ntBASIC14.17□□□□□ -0.14
CHMP24386 NME2P1-201ENST00000426182 414 ntBASIC14.17□□□□□ -0.14
CHMP24386 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 GHSR-202ENST00000427970 912 ntBASIC14.17□□□□□ -0.14
CHMP24386 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 MYCLP2-201ENST00000449268 967 ntBASIC14.17□□□□□ -0.14
CHMP24386 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 KRT18P43-201ENST00000469825 1281 ntBASIC14.17□□□□□ -0.14
CHMP24386 AC011495.1-201ENST00000498085 584 ntBASIC14.17□□□□□ -0.14
CHMP24386 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.17□□□□□ -0.14
CHMP24386 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.17□□□□□ -0.14
CHMP24386 TMEM261P1-201ENST00000604899 340 ntBASIC14.17□□□□□ -0.14
CHMP24386 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CHMP24386 AC007431.3-201ENST00000623221 587 ntBASIC14.17□□□□□ -0.14
CHMP24386 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHMP24386 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 AC015656.1-201ENST00000624209 3578 ntBASIC14.17□□□□□ -0.14
CHMP24386 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CHMP24386 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.17□□□□□ -0.14
CHMP24386 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 AC097376.2-205ENST00000610159 5334 ntBASIC14.17□□□□□ -0.14
CHMP24386 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.17□□□□□ -0.14
CHMP24386 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.17□□□□□ -0.14
CHMP24386 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CHMP24386 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.16□□□□□ -0.14
CHMP24386 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.16□□□□□ -0.14
CHMP24386 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CHMP24386 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 AC027601.5-201ENST00000624065 2482 ntBASIC14.16□□□□□ -0.14
CHMP24386 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.16□□□□□ -0.14
CHMP24386 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 HSPA7-201ENST00000445535 1927 ntBASIC14.16□□□□□ -0.14
CHMP24386 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CHMP24386 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CHMP24386 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHMP24386 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CHMP24386 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CHMP24386 AP006294.1-201ENST00000415407 339 ntBASIC14.16□□□□□ -0.14
CHMP24386 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.16□□□□□ -0.14
CHMP24386 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.16□□□□□ -0.14
CHMP24386 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.16□□□□□ -0.14
CHMP24386 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms