Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EPHA1P21709 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.06□□□□□ -0.32
EPHA1P21709 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.06□□□□□ -0.32
EPHA1P21709 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.06□□□□□ -0.32
EPHA1P21709 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
EPHA1P21709 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EPHA1P21709 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EPHA1P21709 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.06□□□□□ -0.32
EPHA1P21709 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
EPHA1P21709 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
EPHA1P21709 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
EPHA1P21709 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
EPHA1P21709 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 AC131212.3-201ENST00000624087 4219 ntBASIC13.05□□□□□ -0.32
EPHA1P21709 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 AC007191.1-201ENST00000623179 2995 ntBASIC13.05□□□□□ -0.32
EPHA1P21709 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
EPHA1P21709 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.05□□□□□ -0.32
EPHA1P21709 AL589987.1-201ENST00000453380 819 ntBASIC13.05□□□□□ -0.32
EPHA1P21709 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.05□□□□□ -0.32
EPHA1P21709 RRP7BP-205ENST00000566851 833 ntBASIC13.05□□□□□ -0.32
EPHA1P21709 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 CTBP2P3-201ENST00000585629 1255 ntBASIC13.05□□□□□ -0.32
EPHA1P21709 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.05□□□□□ -0.32
EPHA1P21709 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
EPHA1P21709 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.05□□□□□ -0.32
EPHA1P21709 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
EPHA1P21709 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
EPHA1P21709 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.05□□□□□ -0.32
EPHA1P21709 AL691432.1-201ENST00000596308 1422 ntBASIC13.05□□□□□ -0.32
EPHA1P21709 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.04□□□□□ -0.32
EPHA1P21709 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
EPHA1P21709 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
EPHA1P21709 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.04□□□□□ -0.32
EPHA1P21709 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.04□□□□□ -0.32
EPHA1P21709 LINC00552-201ENST00000625151 2579 ntBASIC13.04□□□□□ -0.32
EPHA1P21709 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
EPHA1P21709 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 CYP4F24P-201ENST00000586049 1580 ntBASIC13.04□□□□□ -0.32
EPHA1P21709 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
EPHA1P21709 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.04□□□□□ -0.32
EPHA1P21709 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
EPHA1P21709 AC007389.4-201ENST00000454674 793 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms