Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MIR5189-201ENST00000577370 114 ntBASIC15.25■□□□□ 0.03
HLA-DPA1P20036 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 AC018442.1-201ENST00000421439 2061 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 CICP14-201ENST00000629111 2732 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AL513477.1-201ENST00000602865 2407 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 BAATP1-201ENST00000412284 1225 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AP005018.1-201ENST00000525475 301 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AC068587.3-201ENST00000526613 355 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 TDH-203ENST00000531764 1110 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AC005225.4-201ENST00000557330 545 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 RPSAP52-203ENST00000622976 1023 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 LINC02228-204ENST00000642115 2962 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AL390755.1-201ENST00000623716 2027 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AC138969.2-201ENST00000532739 9932 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HLA-DPA1P20036 AC018665.1-201ENST00000622927 1362 ntBASIC15.24■□□□□ 0.03
HLA-DPA1P20036 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 AC134312.5-201ENST00000568031 1313 ntBASIC15.23■□□□□ 0.03
HLA-DPA1P20036 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HLA-DPA1P20036 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms