Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB1P11230 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CHRNB1P11230 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 ISCA2P1-201ENST00000425548 448 ntBASIC15.26■□□□□ 0.03
CHRNB1P11230 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNB1P11230 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.26■□□□□ 0.03
CHRNB1P11230 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNB1P11230 AC019193.1-201ENST00000506678 823 ntBASIC15.26■□□□□ 0.03
CHRNB1P11230 AC116345.2-201ENST00000512837 523 ntBASIC15.26■□□□□ 0.03
CHRNB1P11230 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 RTN3P1-201ENST00000536295 711 ntBASIC15.26■□□□□ 0.03
CHRNB1P11230 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB1P11230 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CHRNB1P11230 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.26■□□□□ 0.03
CHRNB1P11230 AC012044.1-201ENST00000603431 297 ntBASIC15.26■□□□□ 0.03
CHRNB1P11230 AC073352.2-201ENST00000609385 439 ntBASIC15.26■□□□□ 0.03
CHRNB1P11230 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.26■□□□□ 0.03
CHRNB1P11230 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CHRNB1P11230 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB1P11230 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB1P11230 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CHRNB1P11230 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.26■□□□□ 0.03
CHRNB1P11230 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNB1P11230 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNB1P11230 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNB1P11230 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CHRNB1P11230 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CHRNB1P11230 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.25■□□□□ 0.03
CHRNB1P11230 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNB1P11230 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.25■□□□□ 0.03
CHRNB1P11230 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.25■□□□□ 0.03
CHRNB1P11230 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 AC010141.1-201ENST00000411585 623 ntBASIC15.25■□□□□ 0.03
CHRNB1P11230 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNB1P11230 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CHRNB1P11230 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 AC242376.1-201ENST00000559033 726 ntBASIC15.25■□□□□ 0.03
CHRNB1P11230 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 MIR4750-201ENST00000584564 56 ntBASIC15.25■□□□□ 0.03
CHRNB1P11230 AL132994.2-201ENST00000603120 687 ntBASIC15.25■□□□□ 0.03
CHRNB1P11230 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNB1P11230 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.25■□□□□ 0.03
CHRNB1P11230 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CHRNB1P11230 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CHRNB1P11230 E2F3P2-201ENST00000447755 1422 ntBASIC15.25■□□□□ 0.03
CHRNB1P11230 INE2-201ENST00000630399 1874 ntBASIC15.25■□□□□ 0.03
CHRNB1P11230 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CHRNB1P11230 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CHRNB1P11230 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNB1P11230 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CHRNB1P11230 PAUPAR-201ENST00000630360 2965 ntBASIC15.24■□□□□ 0.03
CHRNB1P11230 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRNB1P11230 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms