Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 PCDHA3-202ENST00000532566 4594 ntBASIC15.28■□□□□ 0.04
HLA-DQB2P05538 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DQB2P05538 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.04
HLA-DQB2P05538 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.27■□□□□ 0.04
HLA-DQB2P05538 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AL590640.2-201ENST00000457038 527 ntBASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 RN7SL48P-201ENST00000579283 293 ntBASIC15.27■□□□□ 0.04
HLA-DQB2P05538 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AL022328.1-201ENST00000610050 478 ntBASIC15.27■□□□□ 0.04
HLA-DQB2P05538 AC244669.2-201ENST00000612320 853 ntBASIC15.27■□□□□ 0.04
HLA-DQB2P05538 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DQB2P05538 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 AC003102.2-201ENST00000589195 1469 ntBASIC15.27■□□□□ 0.03
HLA-DQB2P05538 INTS4P1-203ENST00000641008 3683 ntBASIC15.27■□□□□ 0.03
HLA-DQB2P05538 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.27■□□□□ 0.03
HLA-DQB2P05538 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 CR383656.12-201ENST00000549567 513 ntBASIC15.26■□□□□ 0.03
HLA-DQB2P05538 ECM1P1-201ENST00000604092 1279 ntBASIC15.26■□□□□ 0.03
HLA-DQB2P05538 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DQB2P05538 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms