Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 AHCYP3-201ENST00000420053 1279 ntBASIC9.07□□□□□ -0.96
APOBP04114 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
APOBP04114 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC9.07□□□□□ -0.96
APOBP04114 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
APOBP04114 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC9.07□□□□□ -0.96
APOBP04114 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC9.06□□□□□ -0.96
APOBP04114 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 BAX-205ENST00000391871 687 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 SOD2-205ENST00000444946 917 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC9.06□□□□□ -0.96
APOBP04114 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 AL353622.2-201ENST00000605846 425 ntBASIC9.06□□□□□ -0.96
APOBP04114 ST5-261ENST00000626808 1071 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 PHB-210ENST00000511832 1509 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
APOBP04114 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 AC027612.2-202ENST00000445955 1199 ntBASIC9.06□□□□□ -0.96
APOBP04114 BX322534.1-201ENST00000635574 241 ntBASIC9.06□□□□□ -0.96
APOBP04114 AC215524.1-201ENST00000635696 241 ntBASIC9.06□□□□□ -0.96
APOBP04114 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 HNRNPA1P2-207ENST00000432375 960 ntBASIC9.06□□□□□ -0.96
APOBP04114 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC9.06□□□□□ -0.96
APOBP04114 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 HIST1H2APS2-201ENST00000454426 370 ntBASIC9.06□□□□□ -0.96
APOBP04114 SCARNA12-201ENST00000459155 270 ntBASIC9.06□□□□□ -0.96
APOBP04114 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC9.06□□□□□ -0.96
APOBP04114 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 AL591122.2-201ENST00000624125 1853 ntBASIC9.06□□□□□ -0.96
APOBP04114 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.06□□□□□ -0.96
APOBP04114 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
APOBP04114 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 CICP23-201ENST00000605013 2741 ntBASIC9.05□□□□□ -0.96
APOBP04114 MIR1301-201ENST00000408518 82 ntBASIC9.05□□□□□ -0.96
APOBP04114 AL451000.1-201ENST00000451300 1186 ntBASIC9.05□□□□□ -0.96
APOBP04114 LTB4R2-202ENST00000528054 3092 ntBASIC9.05□□□□□ -0.96
APOBP04114 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 MX1-218ENST00000619682 1980 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 AL137077.2-201ENST00000635124 1608 ntBASIC9.05□□□□□ -0.96
APOBP04114 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 AC092612.1-201ENST00000514501 998 ntBASIC9.05□□□□□ -0.96
APOBP04114 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC9.05□□□□□ -0.96
APOBP04114 CES1P2-201ENST00000566467 1242 ntBASIC9.05□□□□□ -0.96
APOBP04114 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC9.05□□□□□ -0.96
APOBP04114 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
APOBP04114 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
APOBP04114 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms