Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.69□□□□□ -0.06
KRT6AP02538 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.69□□□□□ -0.06
KRT6AP02538 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.69□□□□□ -0.06
KRT6AP02538 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
KRT6AP02538 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.69□□□□□ -0.06
KRT6AP02538 BASP1P1-201ENST00000430708 665 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 RN7SL399P-201ENST00000471648 279 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 AC026410.3-201ENST00000514280 936 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.69□□□□□ -0.06
KRT6AP02538 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.69□□□□□ -0.06
KRT6AP02538 AC104794.3-201ENST00000566840 1248 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 AL049840.4-201ENST00000602422 811 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 AC107373.2-201ENST00000607735 490 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.69□□□□□ -0.06
KRT6AP02538 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
KRT6AP02538 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 AL157414.3-201ENST00000624276 1954 ntBASIC14.69□□□□□ -0.06
KRT6AP02538 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
KRT6AP02538 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
KRT6AP02538 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.69□□□□□ -0.06
KRT6AP02538 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
KRT6AP02538 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6AP02538 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
KRT6AP02538 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6AP02538 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6AP02538 AL158070.2-201ENST00000623713 1621 ntBASIC14.68□□□□□ -0.06
KRT6AP02538 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 NUS1P3-201ENST00000423502 862 ntBASIC14.68□□□□□ -0.06
KRT6AP02538 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.68□□□□□ -0.06
KRT6AP02538 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC14.68□□□□□ -0.06
KRT6AP02538 DOC2GP-202ENST00000514950 1163 ntBASIC14.68□□□□□ -0.06
KRT6AP02538 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 AC093813.1-201ENST00000605066 256 ntBASIC14.68□□□□□ -0.06
KRT6AP02538 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.68□□□□□ -0.06
KRT6AP02538 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
KRT6AP02538 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6AP02538 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.68□□□□□ -0.06
KRT6AP02538 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
KRT6AP02538 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.68□□□□□ -0.06
KRT6AP02538 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 AC015656.1-201ENST00000624209 3578 ntBASIC14.68□□□□□ -0.06
KRT6AP02538 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.68□□□□□ -0.06
KRT6AP02538 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
KRT6AP02538 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
KRT6AP02538 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms