Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.12□□□□□ -0.31
CCNKO75909 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.12□□□□□ -0.31
CCNKO75909 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
CCNKO75909 TSSC2-201ENST00000450217 709 ntBASIC13.12□□□□□ -0.31
CCNKO75909 DUX4L26-201ENST00000489078 1255 ntBASIC13.12□□□□□ -0.31
CCNKO75909 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.12□□□□□ -0.31
CCNKO75909 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CCNKO75909 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 AL022323.5-201ENST00000624101 2059 ntBASIC13.12□□□□□ -0.31
CCNKO75909 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCNKO75909 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCNKO75909 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.12□□□□□ -0.31
CCNKO75909 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.11□□□□□ -0.31
CCNKO75909 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 AC090505.1-201ENST00000430515 1834 ntBASIC13.11□□□□□ -0.31
CCNKO75909 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCNKO75909 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC13.11□□□□□ -0.31
CCNKO75909 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCNKO75909 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CCNKO75909 RPL5P21-201ENST00000404620 815 ntBASIC13.11□□□□□ -0.31
CCNKO75909 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
CCNKO75909 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 SLC25A6P2-201ENST00000497974 877 ntBASIC13.11□□□□□ -0.31
CCNKO75909 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13.11□□□□□ -0.31
CCNKO75909 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.11□□□□□ -0.31
CCNKO75909 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 AL139424.1-201ENST00000607572 797 ntBASIC13.11□□□□□ -0.31
CCNKO75909 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.11□□□□□ -0.31
CCNKO75909 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.11□□□□□ -0.31
CCNKO75909 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC13.11□□□□□ -0.31
CCNKO75909 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.11□□□□□ -0.31
CCNKO75909 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.11□□□□□ -0.31
CCNKO75909 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CCNKO75909 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CCNKO75909 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.1□□□□□ -0.31
CCNKO75909 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCNKO75909 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CCNKO75909 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms