Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDH16O75309 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDH16O75309 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDH16O75309 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH16O75309 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH16O75309 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH16O75309 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDH16O75309 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDH16O75309 AC211486.1-202ENST00000416371 468 ntBASIC15.3■□□□□ 0.04
CDH16O75309 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CDH16O75309 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.3■□□□□ 0.04
CDH16O75309 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH16O75309 SERBP1P3-201ENST00000459980 809 ntBASIC15.3■□□□□ 0.04
CDH16O75309 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 AC211476.1-201ENST00000503899 468 ntBASIC15.3■□□□□ 0.04
CDH16O75309 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH16O75309 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH16O75309 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH16O75309 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.3■□□□□ 0.04
CDH16O75309 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH16O75309 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.3■□□□□ 0.04
CDH16O75309 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH16O75309 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.3■□□□□ 0.04
CDH16O75309 AC006538.3-201ENST00000612495 578 ntBASIC15.3■□□□□ 0.04
CDH16O75309 LINC00628-201ENST00000628516 1289 ntBASIC15.3■□□□□ 0.04
CDH16O75309 AF228730.6-201ENST00000641497 218 ntBASIC15.3■□□□□ 0.04
CDH16O75309 AC084121.3-201ENST00000641716 218 ntBASIC15.3■□□□□ 0.04
CDH16O75309 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDH16O75309 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
CDH16O75309 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDH16O75309 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDH16O75309 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
CDH16O75309 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH16O75309 INE2-201ENST00000630399 1874 ntBASIC15.29■□□□□ 0.04
CDH16O75309 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH16O75309 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 AC007326.2-201ENST00000624224 7579 ntBASIC15.29■□□□□ 0.04
CDH16O75309 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 KRT18P32-201ENST00000424695 1287 ntBASIC15.29■□□□□ 0.04
CDH16O75309 AC005237.2-201ENST00000434368 219 ntBASIC15.29■□□□□ 0.04
CDH16O75309 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH16O75309 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH16O75309 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.29■□□□□ 0.04
CDH16O75309 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH16O75309 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH16O75309 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH16O75309 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH16O75309 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 AL157414.3-201ENST00000624276 1954 ntBASIC15.29■□□□□ 0.04
CDH16O75309 AC090505.1-201ENST00000430515 1834 ntBASIC15.29■□□□□ 0.04
CDH16O75309 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH16O75309 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH16O75309 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
CDH16O75309 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH16O75309 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH16O75309 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 KRT8P24-201ENST00000560290 1559 ntBASIC15.28■□□□□ 0.04
CDH16O75309 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH16O75309 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH16O75309 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH16O75309 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH16O75309 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms