Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 AC060766.1-201ENST00000590824 627 ntBASIC16.42■□□□□ 0.22
RNF40O75150 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.42■□□□□ 0.22
RNF40O75150 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.42■□□□□ 0.22
RNF40O75150 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RNF40O75150 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
RNF40O75150 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.42■□□□□ 0.22
RNF40O75150 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.42■□□□□ 0.22
RNF40O75150 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF40O75150 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RNF40O75150 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RNF40O75150 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RNF40O75150 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 REXO1L1P-202ENST00000608646 1974 ntBASIC16.41■□□□□ 0.22
RNF40O75150 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RNF40O75150 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 TMEM14DP-201ENST00000422205 345 ntBASIC16.41■□□□□ 0.22
RNF40O75150 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 AC022494.1-201ENST00000466044 728 ntBASIC16.41■□□□□ 0.22
RNF40O75150 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RNF40O75150 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RNF40O75150 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 HSPA7-201ENST00000445535 1927 ntBASIC16.41■□□□□ 0.22
RNF40O75150 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC16.41■□□□□ 0.22
RNF40O75150 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
RNF40O75150 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF40O75150 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF40O75150 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.4■□□□□ 0.22
RNF40O75150 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.4■□□□□ 0.22
RNF40O75150 AC022210.1-201ENST00000449856 793 ntBASIC16.4■□□□□ 0.22
RNF40O75150 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF40O75150 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF40O75150 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.4■□□□□ 0.22
RNF40O75150 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.4■□□□□ 0.22
RNF40O75150 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF40O75150 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.4■□□□□ 0.22
RNF40O75150 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RNF40O75150 ZBED1P1-201ENST00000502364 1930 ntBASIC16.4■□□□□ 0.22
RNF40O75150 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms