Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
NACAE9PAV3 AC126335.2-201ENST00000623362 4637 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.16□□□□□ -0.62
NACAE9PAV3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 KRT18P64-201ENST00000434946 1219 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.16□□□□□ -0.62
NACAE9PAV3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.16□□□□□ -0.62
NACAE9PAV3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.16□□□□□ -0.62
NACAE9PAV3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
NACAE9PAV3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 RN7SL828P-201ENST00000607615 303 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.16□□□□□ -0.62
NACAE9PAV3 RAB34-223ENST00000636154 730 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 HADH-212ENST00000638621 741 ntTSL 5 BASIC11.16□□□□□ -0.62
NACAE9PAV3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC11.16□□□□□ -0.62
NACAE9PAV3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 REXO1L4P-201ENST00000605109 1937 ntBASIC11.16□□□□□ -0.62
NACAE9PAV3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
NACAE9PAV3 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
NACAE9PAV3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 SHANK2-211ENST00000449833 8850 ntTSL 5 BASIC11.15□□□□□ -0.62
NACAE9PAV3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.15□□□□□ -0.62
NACAE9PAV3 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 REXO1L2P-201ENST00000425429 2069 ntBASIC11.15□□□□□ -0.62
NACAE9PAV3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
NACAE9PAV3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.15□□□□□ -0.62
NACAE9PAV3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 TERF1P3-201ENST00000505638 1227 ntBASIC11.15□□□□□ -0.62
NACAE9PAV3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.15□□□□□ -0.62
NACAE9PAV3 CECR7-204ENST00000609932 568 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC11.15□□□□□ -0.62
NACAE9PAV3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC11.15□□□□□ -0.62
NACAE9PAV3 AL033527.5-202ENST00000641632 1098 ntBASIC11.15□□□□□ -0.62
NACAE9PAV3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 MROH4P-201ENST00000431302 1578 ntBASIC11.15□□□□□ -0.62
NACAE9PAV3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 SLC7A15P-201ENST00000424028 1363 ntBASIC11.15□□□□□ -0.62
NACAE9PAV3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.15□□□□□ -0.62
NACAE9PAV3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
NACAE9PAV3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.15□□□□□ -0.62
NACAE9PAV3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC11.15□□□□□ -0.62
NACAE9PAV3 CICP11-201ENST00000434745 2827 ntBASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms