Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NPIPB4C9JG80 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC005229.1-201ENST00000392885 409 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC011495.1-201ENST00000498085 584 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC010319.3-201ENST00000597028 470 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC004466.1-201ENST00000599515 1080 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AP001002.3-201ENST00000623482 206 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC132938.4-201ENST00000623835 848 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 CLUHP2-201ENST00000426660 1303 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 AP000593.2-201ENST00000542775 1433 ntBASIC13.3□□□□□ -0.28
NPIPB4C9JG80 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NPIPB4C9JG80 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 AC007389.4-201ENST00000454674 793 ntBASIC13.29□□□□□ -0.28
NPIPB4C9JG80 MYADML-201ENST00000474610 2147 ntBASIC13.29□□□□□ -0.28
NPIPB4C9JG80 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 TDH-203ENST00000531764 1110 ntBASIC13.29□□□□□ -0.28
NPIPB4C9JG80 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NPIPB4C9JG80 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms