Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LYRM9A8MSI8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LYRM9A8MSI8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 KLF2P4-201ENST00000451959 1225 ntBASIC10.77□□□□□ -0.69
LYRM9A8MSI8 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 AHRR-211ENST00000515206 462 ntTSL 5 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 KRT90P-201ENST00000549264 1064 ntBASIC10.77□□□□□ -0.69
LYRM9A8MSI8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 GNRHR2-203ENST00000581100 1187 ntBASIC10.77□□□□□ -0.69
LYRM9A8MSI8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 RHOXF1P1-202ENST00000635473 501 ntBASIC10.77□□□□□ -0.69
LYRM9A8MSI8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
LYRM9A8MSI8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LYRM9A8MSI8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC10.76□□□□□ -0.69
LYRM9A8MSI8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LYRM9A8MSI8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LYRM9A8MSI8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LYRM9A8MSI8 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms