Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 AP001160.2-201ENST00000596071 487 ntBASIC13.56□□□□□ -0.24
TVP23AA6NH52 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 AC113367.3-201ENST00000508316 1912 ntBASIC13.56□□□□□ -0.24
TVP23AA6NH52 BX640514.1-201ENST00000583223 1918 ntBASIC13.56□□□□□ -0.24
TVP23AA6NH52 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
TVP23AA6NH52 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
TVP23AA6NH52 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 HLA-DRB6-201ENST00000411500 1235 ntBASIC13.55□□□□□ -0.24
TVP23AA6NH52 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 AC241585.1-201ENST00000433527 519 ntBASIC13.55□□□□□ -0.24
TVP23AA6NH52 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 AC114501.2-201ENST00000439631 535 ntBASIC13.55□□□□□ -0.24
TVP23AA6NH52 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 AC004066.1-201ENST00000502488 802 ntBASIC13.55□□□□□ -0.24
TVP23AA6NH52 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
TVP23AA6NH52 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 CLK3P2-201ENST00000427566 1453 ntBASIC13.55□□□□□ -0.24
TVP23AA6NH52 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TVP23AA6NH52 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 AP001267.2-201ENST00000532619 2086 ntBASIC13.54□□□□□ -0.24
TVP23AA6NH52 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TVP23AA6NH52 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.54□□□□□ -0.24
TVP23AA6NH52 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms