Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
KCNIP3Q9Y2W7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 TFAMP1-201ENST00000412727 736 ntBASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 EMBP1-201ENST00000458200 901 ntBASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 AL135744.1-201ENST00000565098 629 ntBASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
KCNIP3Q9Y2W7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.71□□□□□ -0.38
KCNIP3Q9Y2W7 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
KCNIP3Q9Y2W7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms