Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHA7Q9UN72 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 BASP1P1-201ENST00000430708 665 ntBASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 AC093214.1-201ENST00000511688 1107 ntBASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHA7Q9UN72 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MYO15B-237ENST00000642007 4893 ntBASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 RNU1-114P-201ENST00000365297 166 ntBASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MEP1AP4-201ENST00000423244 1087 ntBASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 AC134915.1-201ENST00000426461 574 ntBASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 AC026434.2-201ENST00000506094 1078 ntBASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 AC007431.3-201ENST00000623221 587 ntBASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHA7Q9UN72 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 AC092135.3-201ENST00000624151 1846 ntBASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHA7Q9UN72 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms