Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AL390955.2-201ENST00000603032 514 ntBASIC13.41□□□□□ -0.26
DUX4Q9UBX2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
DUX4Q9UBX2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 AL691432.1-201ENST00000596308 1422 ntBASIC13.4□□□□□ -0.26
DUX4Q9UBX2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 POU5F2-201ENST00000606183 8418 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 PNMT-202ENST00000394246 821 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 MIR943-201ENST00000401286 94 ntBASIC13.4□□□□□ -0.26
DUX4Q9UBX2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 AC092580.3-201ENST00000430932 139 ntBASIC13.4□□□□□ -0.26
DUX4Q9UBX2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 AL139010.1-201ENST00000454878 894 ntBASIC13.4□□□□□ -0.26
DUX4Q9UBX2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 CYMP-203ENST00000474680 1263 ntBASIC13.4□□□□□ -0.26
DUX4Q9UBX2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DUX4Q9UBX2 CICP20-201ENST00000443330 2801 ntBASIC13.4□□□□□ -0.27
DUX4Q9UBX2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.4□□□□□ -0.27
DUX4Q9UBX2 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DUX4Q9UBX2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms