Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AC107373.2-201ENST00000607735 490 ntBASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AL844908.2-201ENST00000609461 460 ntBASIC14.9□□□□□ -0.02
MKS1Q9NXB0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
MKS1Q9NXB0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 AC012617.1-204ENST00000586340 2305 ntBASIC14.89□□□□□ -0.03
MKS1Q9NXB0 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 NUS1P3-201ENST00000423502 862 ntBASIC14.89□□□□□ -0.03
MKS1Q9NXB0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 AL671883.3-201ENST00000603274 991 ntBASIC14.89□□□□□ -0.03
MKS1Q9NXB0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
MKS1Q9NXB0 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 CR383656.2-201ENST00000548656 2254 ntBASIC14.88□□□□□ -0.03
MKS1Q9NXB0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MKS1Q9NXB0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms