Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 KRT17P7-201ENST00000451704 1104 ntBASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 KRT8P23-201ENST00000560090 1207 ntBASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 SPDYE22P-201ENST00000582158 798 ntBASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 AC008267.7-201ENST00000624570 1194 ntBASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 AC023090.2-201ENST00000625182 2110 ntBASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCM2LQ9NUG4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 COX5BP8-201ENST00000416911 349 ntBASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 AC022494.1-201ENST00000466044 728 ntBASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 AC027307.2-201ENST00000591252 911 ntBASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 AL645728.2-202ENST00000641679 227 ntBASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCM2LQ9NUG4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCM2LQ9NUG4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms