Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11XQ9BZA7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
PCDH11XQ9BZA7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11XQ9BZA7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11XQ9BZA7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11XQ9BZA7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCDH11XQ9BZA7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.27■□□□□ 0.67
PCDH11XQ9BZA7 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 AC093752.3-201ENST00000567343 901 ntBASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 WASH3P-207ENST00000560956 1394 ntBASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 KRT18P9-201ENST00000604826 1300 ntBASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 AL590440.2-201ENST00000641973 1595 ntBASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PCDH11XQ9BZA7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 DUTP3-201ENST00000450025 415 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 RN7SL818P-201ENST00000485099 259 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 CTBP2P4-201ENST00000513884 920 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 MIR4649-201ENST00000582839 64 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 RPL17P45-201ENST00000586289 509 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 RN7SL725P-201ENST00000606439 259 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 AL627389.1-201ENST00000413508 1182 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 OR2R1P-201ENST00000441404 914 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 RPSAP15-201ENST00000448168 861 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 CHCHD2P9-201ENST00000461726 456 ntBASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDH11XQ9BZA7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDH11XQ9BZA7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms