Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.46□□□□□ -0.25
VRK1Q99986 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
VRK1Q99986 AC098850.1-201ENST00000419919 790 ntBASIC13.46□□□□□ -0.25
VRK1Q99986 EEF1DP4-201ENST00000446006 880 ntBASIC13.46□□□□□ -0.25
VRK1Q99986 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.46□□□□□ -0.25
VRK1Q99986 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.46□□□□□ -0.25
VRK1Q99986 AL008721.1-201ENST00000609964 604 ntBASIC13.46□□□□□ -0.25
VRK1Q99986 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
VRK1Q99986 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.46□□□□□ -0.25
VRK1Q99986 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
VRK1Q99986 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.46□□□□□ -0.26
VRK1Q99986 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VRK1Q99986 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.46□□□□□ -0.26
VRK1Q99986 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK1Q99986 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK1Q99986 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.46□□□□□ -0.26
VRK1Q99986 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK1Q99986 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.46□□□□□ -0.26
VRK1Q99986 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VRK1Q99986 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.46□□□□□ -0.26
VRK1Q99986 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
VRK1Q99986 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
VRK1Q99986 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
VRK1Q99986 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
VRK1Q99986 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
VRK1Q99986 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK1Q99986 TTTY23B-201ENST00000442790 549 ntBASIC13.45□□□□□ -0.26
VRK1Q99986 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 GPR53P-205ENST00000457298 1084 ntBASIC13.45□□□□□ -0.26
VRK1Q99986 RN7SL399P-201ENST00000471648 279 ntBASIC13.45□□□□□ -0.26
VRK1Q99986 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK1Q99986 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.45□□□□□ -0.26
VRK1Q99986 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.45□□□□□ -0.26
VRK1Q99986 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 IGHV3-72-202ENST00000621503 303 ntBASIC13.45□□□□□ -0.26
VRK1Q99986 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
VRK1Q99986 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
VRK1Q99986 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 AC011477.6-201ENST00000604980 1927 ntBASIC13.45□□□□□ -0.26
VRK1Q99986 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
VRK1Q99986 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.44□□□□□ -0.26
VRK1Q99986 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.44□□□□□ -0.26
VRK1Q99986 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
VRK1Q99986 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms