Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.37■□□□□ 0.37
ARID3AQ99856 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ARID3AQ99856 HMGN1P19-201ENST00000436976 333 ntBASIC17.37■□□□□ 0.37
ARID3AQ99856 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.37■□□□□ 0.37
ARID3AQ99856 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.37■□□□□ 0.37
ARID3AQ99856 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.37■□□□□ 0.37
ARID3AQ99856 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.37■□□□□ 0.37
ARID3AQ99856 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.37■□□□□ 0.37
ARID3AQ99856 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.37■□□□□ 0.37
ARID3AQ99856 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.37■□□□□ 0.37
ARID3AQ99856 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.37■□□□□ 0.37
ARID3AQ99856 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ARID3AQ99856 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
ARID3AQ99856 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
ARID3AQ99856 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC17.37■□□□□ 0.37
ARID3AQ99856 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
ARID3AQ99856 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.37■□□□□ 0.37
ARID3AQ99856 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC17.37■□□□□ 0.37
ARID3AQ99856 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.36■□□□□ 0.37
ARID3AQ99856 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC17.36■□□□□ 0.37
ARID3AQ99856 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
ARID3AQ99856 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.36■□□□□ 0.37
ARID3AQ99856 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 FGD5P1-202ENST00000614866 2498 ntBASIC17.36■□□□□ 0.37
ARID3AQ99856 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 AL139400.1-201ENST00000366220 510 ntBASIC17.36■□□□□ 0.37
ARID3AQ99856 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 MIR648-201ENST00000385046 94 ntBASIC17.36■□□□□ 0.37
ARID3AQ99856 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.36■□□□□ 0.37
ARID3AQ99856 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.36■□□□□ 0.37
ARID3AQ99856 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.36■□□□□ 0.37
ARID3AQ99856 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.36■□□□□ 0.37
ARID3AQ99856 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.36■□□□□ 0.37
ARID3AQ99856 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
ARID3AQ99856 AC026150.2-201ENST00000564693 1156 ntBASIC17.36■□□□□ 0.37
ARID3AQ99856 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
ARID3AQ99856 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC17.36■□□□□ 0.37
ARID3AQ99856 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.36■□□□□ 0.37
ARID3AQ99856 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC17.36■□□□□ 0.37
ARID3AQ99856 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
ARID3AQ99856 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ARID3AQ99856 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 RN7SL832P-201ENST00000607781 1756 ntBASIC17.35■□□□□ 0.37
ARID3AQ99856 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.35■□□□□ 0.37
ARID3AQ99856 AL031595.1-201ENST00000623969 4709 ntBASIC17.35■□□□□ 0.37
ARID3AQ99856 AC134407.2-201ENST00000625089 1978 ntBASIC17.35■□□□□ 0.37
ARID3AQ99856 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.35■□□□□ 0.37
ARID3AQ99856 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.35■□□□□ 0.37
ARID3AQ99856 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.35■□□□□ 0.37
ARID3AQ99856 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.35■□□□□ 0.37
ARID3AQ99856 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.35■□□□□ 0.37
ARID3AQ99856 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.35■□□□□ 0.37
ARID3AQ99856 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ARID3AQ99856 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms