Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL13Q99616 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL13Q99616 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.68□□□□□ -0.38
CCL13Q99616 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 AL022328.1-201ENST00000610050 478 ntBASIC12.68□□□□□ -0.38
CCL13Q99616 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 AC055811.4-201ENST00000624039 1754 ntBASIC12.68□□□□□ -0.38
CCL13Q99616 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL13Q99616 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CCL13Q99616 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 TNRC18P2-201ENST00000417666 2714 ntBASIC12.67□□□□□ -0.38
CCL13Q99616 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CCL13Q99616 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
CCL13Q99616 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL13Q99616 EIF3FP3-201ENST00000434851 1086 ntBASIC12.67□□□□□ -0.38
CCL13Q99616 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL13Q99616 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.67□□□□□ -0.38
CCL13Q99616 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL13Q99616 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.67□□□□□ -0.38
CCL13Q99616 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.67□□□□□ -0.38
CCL13Q99616 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CCL13Q99616 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CCL13Q99616 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.67□□□□□ -0.38
CCL13Q99616 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms