Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NDNQ99608 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NDNQ99608 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.23■□□□□ 0.03
NDNQ99608 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.23■□□□□ 0.03
NDNQ99608 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.23■□□□□ 0.03
NDNQ99608 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.23■□□□□ 0.03
NDNQ99608 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.23■□□□□ 0.03
NDNQ99608 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.23■□□□□ 0.03
NDNQ99608 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC15.23■□□□□ 0.03
NDNQ99608 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NDNQ99608 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
NDNQ99608 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NDNQ99608 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NDNQ99608 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NDNQ99608 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.23■□□□□ 0.03
NDNQ99608 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.22■□□□□ 0.03
NDNQ99608 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 AC140479.7-201ENST00000636301 2332 ntBASIC15.22■□□□□ 0.03
NDNQ99608 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.22■□□□□ 0.03
NDNQ99608 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.22■□□□□ 0.03
NDNQ99608 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
NDNQ99608 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 AC023310.3-201ENST00000557027 670 ntBASIC15.22■□□□□ 0.03
NDNQ99608 AC100756.1-201ENST00000562736 682 ntBASIC15.22■□□□□ 0.03
NDNQ99608 AC138749.3-201ENST00000567691 622 ntBASIC15.22■□□□□ 0.03
NDNQ99608 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.22■□□□□ 0.03
NDNQ99608 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.22■□□□□ 0.03
NDNQ99608 AC116165.1-201ENST00000611806 668 ntBASIC15.22■□□□□ 0.03
NDNQ99608 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.22■□□□□ 0.03
NDNQ99608 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.22■□□□□ 0.03
NDNQ99608 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.22■□□□□ 0.03
NDNQ99608 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.22■□□□□ 0.03
NDNQ99608 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NDNQ99608 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NDNQ99608 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms