Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.73□□□□□ -0.21
SNX33Q8WV41 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.73□□□□□ -0.21
SNX33Q8WV41 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SNX33Q8WV41 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SNX33Q8WV41 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.73□□□□□ -0.21
SNX33Q8WV41 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SNX33Q8WV41 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNX33Q8WV41 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 TARDBPP1-201ENST00000442013 1203 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 AL096865.1-201ENST00000606796 927 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 AL133215.2-201ENST00000609242 977 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 AL590560.3-201ENST00000623350 461 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 LINC01230-201ENST00000625222 3017 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 AC012508.2-201ENST00000567613 1472 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.72□□□□□ -0.21
SNX33Q8WV41 MTHFR-210ENST00000641407 2387 ntBASIC13.72□□□□□ -0.21
SNX33Q8WV41 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNX33Q8WV41 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 KRT8P12-202ENST00000472924 1397 ntBASIC13.71□□□□□ -0.21
SNX33Q8WV41 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNX33Q8WV41 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.71□□□□□ -0.21
SNX33Q8WV41 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms