Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC018638.5-201ENST00000450885 754 ntBASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 GNG10P1-201ENST00000452289 199 ntBASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 KRT18P37-201ENST00000520711 1282 ntBASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 OR5BD1P-201ENST00000532527 817 ntBASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 PCDHA12-202ENST00000613593 2588 ntBASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 IDH3A-213ENST00000559205 566 ntTSL 4 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PRUNE2Q8WUY3 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 RNVU1-8-201ENST00000364272 125 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 HNRNPA1P16-201ENST00000575692 955 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 RN7SL602P-201ENST00000578326 324 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 RN7SL718P-201ENST00000581254 303 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 SNORA57-201ENST00000383870 149 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 AC078814.4-201ENST00000546650 327 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 ALG3P1-201ENST00000508806 1114 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 RNA5SP406-201ENST00000516106 112 ntBASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 NAT9-219ENST00000582524 573 ntTSL 4 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PRUNE2Q8WUY3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 FUCA1P1-201ENST00000374476 1351 ntBASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 TMA16-204ENST00000508268 608 ntTSL 2 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.27■□□□□ 0.04
PRUNE2Q8WUY3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRUNE2Q8WUY3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PRUNE2Q8WUY3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRUNE2Q8WUY3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.27■□□□□ 0.03
PRUNE2Q8WUY3 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PRUNE2Q8WUY3 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms