Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC21■□□□□ 0.95
TMC1Q8TDI8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TMC1Q8TDI8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TMC1Q8TDI8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TMC1Q8TDI8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC21■□□□□ 0.95
TMC1Q8TDI8 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TMC1Q8TDI8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 AC020907.1-201ENST00000616460 1350 ntBASIC20.99■□□□□ 0.95
TMC1Q8TDI8 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 BTBD6P1-201ENST00000412176 1267 ntBASIC20.99■□□□□ 0.95
TMC1Q8TDI8 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 AC007969.1-201ENST00000433675 447 ntBASIC20.99■□□□□ 0.95
TMC1Q8TDI8 CNN2P10-201ENST00000443067 918 ntBASIC20.99■□□□□ 0.95
TMC1Q8TDI8 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 AL360270.3-201ENST00000609118 1348 ntBASIC20.99■□□□□ 0.95
TMC1Q8TDI8 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMC1Q8TDI8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 POR-201ENST00000394893 2532 ntTSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 OR10B1P-201ENST00000601666 907 ntBASIC20.98■□□□□ 0.95
TMC1Q8TDI8 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 LINC02228-204ENST00000642115 2962 ntBASIC20.98■□□□□ 0.95
TMC1Q8TDI8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMC1Q8TDI8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMC1Q8TDI8 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms