Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 FNTAP2-201ENST00000430308 634 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 BX284668.4-201ENST00000453917 508 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 IGHJ2P-201ENST00000454480 60 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 AL109954.1-202ENST00000564051 2148 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ZACNP1-201ENST00000612259 710 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 NFIC-211ENST00000641145 8399 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 AC091951.1-201ENST00000512854 2465 ntBASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.84■□□□□ 0.13
SHKBP1Q8TBC3 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHKBP1Q8TBC3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.83■□□□□ 0.13
SHKBP1Q8TBC3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHKBP1Q8TBC3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHKBP1Q8TBC3 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHKBP1Q8TBC3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SHKBP1Q8TBC3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 HIST2H2BC-201ENST00000498492 580 ntBASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 DUX4L47-201ENST00000566374 394 ntBASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AC020914.3-201ENST00000594712 304 ntBASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AL451050.2-201ENST00000606967 682 ntBASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AL021578.1-201ENST00000613646 709 ntBASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 CLUHP2-201ENST00000426660 1303 ntBASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SHKBP1Q8TBC3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
SHKBP1Q8TBC3 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms