Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12□□□□□ -0.49
TTC9CQ8N5M4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TTC9CQ8N5M4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AC002472.2-201ENST00000442739 958 ntBASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AC114812.1-204ENST00000449669 728 ntBASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 API5-211ENST00000534695 560 ntTSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 ENPP7P5-201ENST00000541031 1031 ntBASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AL359711.2-201ENST00000563105 872 ntBASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AC124283.3-201ENST00000570869 594 ntBASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 CHCHD2P3-201ENST00000603038 451 ntBASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
TTC9CQ8N5M4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 AL137784.3-201ENST00000623858 2288 ntBASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 MIR661-201ENST00000384842 89 ntBASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 AC236430.1-201ENST00000402231 743 ntBASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 AL139094.1-201ENST00000405549 1188 ntBASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 HLA-K-203ENST00000430151 1046 ntBASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.98□□□□□ -0.49
TTC9CQ8N5M4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms