Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AL158070.2-201ENST00000623713 1621 ntBASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 AC107918.4-201ENST00000641966 3141 ntBASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 FGD5P1-202ENST00000614866 2498 ntBASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.63□□□□□ -0.23
NHLRC1Q6VVB1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AL157414.3-201ENST00000624276 1954 ntBASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 PIN1P1-201ENST00000412108 996 ntBASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 MYCLP2-201ENST00000449268 967 ntBASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 TP53TG3HP-202ENST00000569755 579 ntBASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AC004233.3-201ENST00000607794 1269 ntBASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NHLRC1Q6VVB1 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NHLRC1Q6VVB1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms