Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 AC136759.1-202ENST00000530858 2194 ntBASIC13.31□□□□□ -0.28
C11orf88Q6PI97 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
C11orf88Q6PI97 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 PCDHA5-203ENST00000614258 4248 ntBASIC13.3□□□□□ -0.28
C11orf88Q6PI97 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 AL928921.2-201ENST00000641325 2442 ntBASIC13.3□□□□□ -0.28
C11orf88Q6PI97 AL359183.1-201ENST00000623796 2132 ntBASIC13.3□□□□□ -0.28
C11orf88Q6PI97 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 KRT8P23-201ENST00000560090 1207 ntBASIC13.3□□□□□ -0.28
C11orf88Q6PI97 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 AC092364.2-202ENST00000597012 1073 ntBASIC13.3□□□□□ -0.28
C11orf88Q6PI97 AL031055.1-201ENST00000606362 631 ntBASIC13.3□□□□□ -0.28
C11orf88Q6PI97 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.3□□□□□ -0.28
C11orf88Q6PI97 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
C11orf88Q6PI97 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms