Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HIST2H2BCQ6DN03 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HIST2H2BCQ6DN03 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.71□□□□□ -0.38
HIST2H2BCQ6DN03 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC12.71□□□□□ -0.38
HIST2H2BCQ6DN03 AC012313.1-201ENST00000593393 3059 ntBASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AC084364.1-201ENST00000551967 1556 ntBASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 ERP29P1-201ENST00000442902 706 ntBASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 IGHEP2-201ENST00000519308 1256 ntBASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AC133540.1-201ENST00000620845 1019 ntBASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AL137783.1-201ENST00000623494 1896 ntBASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 AL137077.2-201ENST00000635124 1608 ntBASIC12.7□□□□□ -0.38
HIST2H2BCQ6DN03 REXO1L2P-201ENST00000425429 2069 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 FTX-216ENST00000638985 1367 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 TMBIM7P-202ENST00000641474 1516 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AF274858.1-201ENST00000406288 372 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 VENTXP4-201ENST00000449029 958 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 RN7SL288P-201ENST00000490496 291 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AC092612.1-201ENST00000514501 998 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 TRMT112P3-201ENST00000580149 358 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AC090510.3-201ENST00000615831 821 ntBASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.69□□□□□ -0.38
HIST2H2BCQ6DN03 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms