Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 OR5BD1P-201ENST00000532527 817 ntBASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
VPS13DQ5THJ4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 CTBP2P8-201ENST00000422584 1330 ntBASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 OR52M2P-201ENST00000414298 959 ntBASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 AC005740.1-201ENST00000515639 522 ntBASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 RN7SL665P-201ENST00000578793 300 ntBASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ST13P19-201ENST00000442505 1124 ntBASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 F10-203ENST00000409306 1450 ntTSL 3 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 HLA-DQB2-231ENST00000435145 2026 ntBASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC9.8□□□□□ -0.84
VPS13DQ5THJ4 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC9.79□□□□□ -0.84
VPS13DQ5THJ4 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms