Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA8Q53HL2 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 POM121L10P-201ENST00000436994 1285 ntBASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AC108725.1-201ENST00000495472 409 ntBASIC20.69■□□□□ 0.9
CDCA8Q53HL2 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AC005695.3-201ENST00000614522 232 ntBASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AL096828.3-201ENST00000615354 462 ntBASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AC006058.4-201ENST00000624016 1670 ntBASIC20.69■□□□□ 0.9
CDCA8Q53HL2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC20.69■□□□□ 0.9
CDCA8Q53HL2 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 SHC1P1-201ENST00000425230 1745 ntBASIC20.68■□□□□ 0.9
CDCA8Q53HL2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDCA8Q53HL2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 MIR4538-201ENST00000581377 78 ntBASIC20.67■□□□□ 0.9
CDCA8Q53HL2 AC104982.3-201ENST00000581995 514 ntBASIC20.67■□□□□ 0.9
CDCA8Q53HL2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA8Q53HL2 LINC00528-201ENST00000600723 2160 ntBASIC20.67■□□□□ 0.9
CDCA8Q53HL2 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms