Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 HIST3H2BA-201ENST00000436555 524 ntBASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 TARDBPP1-201ENST00000442013 1203 ntBASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 AC015910.1-201ENST00000579400 975 ntBASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 AC087386.2-201ENST00000623212 4637 ntBASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 FAM86C2P-203ENST00000528684 1004 ntBASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 AP000842.3-202ENST00000569238 1080 ntBASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ANKRD55Q3KP44 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.59□□□□□ -0.39
ANKRD55Q3KP44 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms