Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 CTSL-202ENST00000342020 933 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 BANF1P3-201ENST00000412556 261 ntBASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 RPSAP15-201ENST00000448168 861 ntBASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 PGAM1P12-201ENST00000505622 748 ntBASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 AC005041.3-201ENST00000606287 649 ntBASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 PAUPAR-201ENST00000630360 2965 ntBASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.48□□□□□ -0.09
RSPO4Q2I0M5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 NHP2P1-201ENST00000335274 462 ntBASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 FTH1P22-201ENST00000456305 520 ntBASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 AL645728.2-202ENST00000641679 227 ntBASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.47□□□□□ -0.09
RSPO4Q2I0M5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RSPO4Q2I0M5 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms