Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.62□□□□□ -0.39
RIPPLY3P57055 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RIPPLY3P57055 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
RIPPLY3P57055 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
RIPPLY3P57055 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
RIPPLY3P57055 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A7P-201ENST00000382628 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A23P-201ENST00000400136 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A21P-201ENST00000510875 1396 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A15P-201ENST00000514465 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A6P-201ENST00000515148 1394 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A16P-201ENST00000526662 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A9P-201ENST00000527940 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A5P-201ENST00000528738 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A14P-201ENST00000530386 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 FAM90A13P-201ENST00000534703 1395 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 LYPLA2P1-203ENST00000447689 696 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AP003171.2-201ENST00000528208 925 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 MIR5001-201ENST00000580185 100 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AL139339.2-201ENST00000608063 657 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AC024909.3-201ENST00000611513 2257 ntBASIC12.61□□□□□ -0.39
RIPPLY3P57055 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.61□□□□□ -0.39
RIPPLY3P57055 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
RIPPLY3P57055 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 MIR600HG-201ENST00000449175 5984 ntBASIC12.6□□□□□ -0.39
RIPPLY3P57055 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
RIPPLY3P57055 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RIPPLY3P57055 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms