Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 AC117489.1-201ENST00000625169 3217 ntBASIC15.55■□□□□ 0.08
ATXN3P54252 OR2I1P-209ENST00000641730 5365 ntBASIC15.55■□□□□ 0.08
ATXN3P54252 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
ATXN3P54252 CICP4-201ENST00000447359 2812 ntBASIC15.55■□□□□ 0.08
ATXN3P54252 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ATXN3P54252 FAM45BP-202ENST00000592932 1624 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
ATXN3P54252 TCAF2P1-201ENST00000291129 2421 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.54■□□□□ 0.08
ATXN3P54252 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.54■□□□□ 0.08
ATXN3P54252 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.54■□□□□ 0.08
ATXN3P54252 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 TARDBPP1-201ENST00000442013 1203 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 VDAC1P7-201ENST00000462417 847 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.54■□□□□ 0.08
ATXN3P54252 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.54■□□□□ 0.08
ATXN3P54252 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.54■□□□□ 0.08
ATXN3P54252 AP001258.2-201ENST00000529891 490 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.54■□□□□ 0.08
ATXN3P54252 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 AL022328.3-201ENST00000607943 679 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.54■□□□□ 0.08
ATXN3P54252 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.54■□□□□ 0.08
ATXN3P54252 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
ATXN3P54252 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 AC087481.3-201ENST00000602886 1894 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.54■□□□□ 0.08
ATXN3P54252 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.54■□□□□ 0.08
ATXN3P54252 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
ATXN3P54252 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.54■□□□□ 0.08
ATXN3P54252 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
ATXN3P54252 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.53■□□□□ 0.08
ATXN3P54252 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.53■□□□□ 0.08
ATXN3P54252 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
ATXN3P54252 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.53■□□□□ 0.08
ATXN3P54252 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.53■□□□□ 0.08
ATXN3P54252 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.53■□□□□ 0.08
ATXN3P54252 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC15.53■□□□□ 0.08
ATXN3P54252 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.53■□□□□ 0.08
ATXN3P54252 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.53■□□□□ 0.08
ATXN3P54252 TMBIM7P-203ENST00000641617 1718 ntBASIC15.53■□□□□ 0.08
ATXN3P54252 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
ATXN3P54252 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms