Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.06□□□□□ -0.32
HCFC1P51610 FAM58BP-201ENST00000439056 645 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 AC006335.1-201ENST00000445200 547 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.06□□□□□ -0.32
HCFC1P51610 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 AC105250.1-201ENST00000509378 2057 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HCFC1P51610 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HCFC1P51610 AC112693.3-201ENST00000624819 1983 ntBASIC13.06□□□□□ -0.32
HCFC1P51610 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.06□□□□□ -0.32
HCFC1P51610 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 MBLAC2-202ENST00000514906 1936 ntBASIC13.05□□□□□ -0.32
HCFC1P51610 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 FGFR3P1-201ENST00000449999 601 ntBASIC13.05□□□□□ -0.32
HCFC1P51610 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.05□□□□□ -0.32
HCFC1P51610 ALG3P1-201ENST00000508806 1114 ntBASIC13.05□□□□□ -0.32
HCFC1P51610 AC138894.2-201ENST00000602838 371 ntBASIC13.05□□□□□ -0.32
HCFC1P51610 RN7SL736P-201ENST00000613111 269 ntBASIC13.05□□□□□ -0.32
HCFC1P51610 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.05□□□□□ -0.32
HCFC1P51610 CMC1-204ENST00000423894 549 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 AC104073.2-201ENST00000453737 312 ntBASIC13.05□□□□□ -0.32
HCFC1P51610 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HCFC1P51610 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HCFC1P51610 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.05□□□□□ -0.32
HCFC1P51610 AC090616.6-203ENST00000579186 1945 ntBASIC13.04□□□□□ -0.32
HCFC1P51610 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.04□□□□□ -0.32
HCFC1P51610 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HCFC1P51610 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 AL355334.1-201ENST00000417713 215 ntBASIC13.04□□□□□ -0.32
HCFC1P51610 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.04□□□□□ -0.32
HCFC1P51610 TUBB8P8-201ENST00000458717 1058 ntBASIC13.04□□□□□ -0.32
HCFC1P51610 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
HCFC1P51610 RTN3P1-201ENST00000536295 711 ntBASIC13.04□□□□□ -0.32
HCFC1P51610 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.04□□□□□ -0.32
HCFC1P51610 NPM1P43-201ENST00000558669 786 ntBASIC13.04□□□□□ -0.32
HCFC1P51610 AC026803.1-201ENST00000569130 274 ntBASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms