Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 FGD5P1-202ENST00000614866 2498 ntBASIC13.82□□□□□ -0.2
CENPAP49450 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 AL390755.1-201ENST00000623716 2027 ntBASIC13.82□□□□□ -0.2
CENPAP49450 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.82□□□□□ -0.2
CENPAP49450 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 AC027369.6-201ENST00000525520 931 ntBASIC13.82□□□□□ -0.2
CENPAP49450 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.82□□□□□ -0.2
CENPAP49450 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 AL512356.2-201ENST00000546955 174 ntBASIC13.82□□□□□ -0.2
CENPAP49450 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
CENPAP49450 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.82□□□□□ -0.2
CENPAP49450 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.82□□□□□ -0.2
CENPAP49450 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 SPDYE12P-201ENST00000618416 771 ntBASIC13.82□□□□□ -0.2
CENPAP49450 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.82□□□□□ -0.2
CENPAP49450 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 CICP20-201ENST00000443330 2801 ntBASIC13.82□□□□□ -0.2
CENPAP49450 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CENPAP49450 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CENPAP49450 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.82□□□□□ -0.2
CENPAP49450 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CENPAP49450 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.81□□□□□ -0.2
CENPAP49450 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 AC012508.2-201ENST00000567613 1472 ntBASIC13.81□□□□□ -0.2
CENPAP49450 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.81□□□□□ -0.2
CENPAP49450 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 AC074338.1-201ENST00000416825 156 ntBASIC13.81□□□□□ -0.2
CENPAP49450 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.81□□□□□ -0.2
CENPAP49450 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.81□□□□□ -0.2
CENPAP49450 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.81□□□□□ -0.2
CENPAP49450 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.81□□□□□ -0.2
CENPAP49450 AC069120.2-201ENST00000524091 540 ntBASIC13.81□□□□□ -0.2
CENPAP49450 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.81□□□□□ -0.2
CENPAP49450 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.81□□□□□ -0.2
CENPAP49450 AL138828.2-201ENST00000615812 383 ntBASIC13.81□□□□□ -0.2
CENPAP49450 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 AC073592.8-201ENST00000624126 511 ntBASIC13.81□□□□□ -0.2
CENPAP49450 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CENPAP49450 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CENPAP49450 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.81□□□□□ -0.2
CENPAP49450 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CENPAP49450 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CENPAP49450 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms